Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPFP62306 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPFP62306 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPFP62306 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPFP62306 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.76■□□□□ 0.59
SNRPFP62306 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPFP62306 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRPFP62306 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRPFP62306 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRPFP62306 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRPFP62306 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNRPFP62306 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.75■□□□□ 0.59
SNRPFP62306 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRPFP62306 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNRPFP62306 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRPFP62306 AC079781.3-201ENST00000449110 356 ntBASIC18.75■□□□□ 0.59
SNRPFP62306 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRPFP62306 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRPFP62306 AL031008.1-201ENST00000619963 541 ntBASIC18.75■□□□□ 0.59
SNRPFP62306 AC008735.5-201ENST00000623544 497 ntBASIC18.75■□□□□ 0.59
SNRPFP62306 PGM5P2-202ENST00000637225 1043 ntBASIC18.75■□□□□ 0.59
SNRPFP62306 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.75■□□□□ 0.59
SNRPFP62306 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPFP62306 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SNRPFP62306 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.74■□□□□ 0.59
SNRPFP62306 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 AC073621.1-201ENST00000392730 636 ntBASIC18.74■□□□□ 0.59
SNRPFP62306 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 RPS2P1-201ENST00000434010 821 ntBASIC18.74■□□□□ 0.59
SNRPFP62306 PAWRP1-201ENST00000451083 565 ntBASIC18.74■□□□□ 0.59
SNRPFP62306 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 AP002469.2-201ENST00000531724 424 ntBASIC18.74■□□□□ 0.59
SNRPFP62306 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.74■□□□□ 0.59
SNRPFP62306 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRPFP62306 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SNRPFP62306 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRPFP62306 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRPFP62306 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRPFP62306 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 AC092053.1-201ENST00000605787 1936 ntBASIC18.73■□□□□ 0.59
SNRPFP62306 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SNRPFP62306 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNRPFP62306 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRPFP62306 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.73■□□□□ 0.59
SNRPFP62306 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRPFP62306 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRPFP62306 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.73■□□□□ 0.59
SNRPFP62306 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.73■□□□□ 0.59
SNRPFP62306 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRPFP62306 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SNRPFP62306 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRPFP62306 TUBB8P12-201ENST00000308911 1335 ntBASIC18.73■□□□□ 0.59
SNRPFP62306 TUBB7P-202ENST00000428444 1305 ntBASIC18.73■□□□□ 0.59
SNRPFP62306 TUBB8P7-204ENST00000567960 1332 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms