Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN2P57739 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN2P57739 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CLDN2P57739 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN2P57739 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.05■□□□□ 0.32
CLDN2P57739 C20orf181-201ENST00000623918 480 ntBASIC17.05■□□□□ 0.32
CLDN2P57739 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN2P57739 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLDN2P57739 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN2P57739 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN2P57739 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN2P57739 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN2P57739 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN2P57739 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN2P57739 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN2P57739 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN2P57739 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN2P57739 RHOQP3-201ENST00000437982 621 ntBASIC17.04■□□□□ 0.32
CLDN2P57739 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN2P57739 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CLDN2P57739 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN2P57739 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN2P57739 PDPK2P-202ENST00000562415 1191 ntBASIC17.04■□□□□ 0.32
CLDN2P57739 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN2P57739 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN2P57739 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN2P57739 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN2P57739 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN2P57739 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN2P57739 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN2P57739 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN2P57739 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN2P57739 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN2P57739 CXCL1P1-201ENST00000502804 216 ntBASIC17.03■□□□□ 0.32
CLDN2P57739 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN2P57739 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN2P57739 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN2P57739 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN2P57739 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN2P57739 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN2P57739 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN2P57739 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN2P57739 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN2P57739 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN2P57739 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN2P57739 NOC2LP1-202ENST00000452600 2235 ntBASIC17.02■□□□□ 0.32
CLDN2P57739 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN2P57739 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN2P57739 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN2P57739 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN2P57739 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN2P57739 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLDN2P57739 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN2P57739 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN2P57739 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN2P57739 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN2P57739 YBX1P5-201ENST00000509441 847 ntBASIC17.02■□□□□ 0.32
CLDN2P57739 AC023141.13-201ENST00000604991 943 ntBASIC17.02■□□□□ 0.32
CLDN2P57739 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN2P57739 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN2P57739 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN2P57739 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN2P57739 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN2P57739 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN2P57739 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN2P57739 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.02■□□□□ 0.31
CLDN2P57739 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN2P57739 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CLDN2P57739 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN2P57739 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLDN2P57739 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CLDN2P57739 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN2P57739 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLDN2P57739 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN2P57739 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN2P57739 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN2P57739 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN2P57739 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN2P57739 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN2P57739 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms