Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK7P50613 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK7P50613 AC090164.3-201ENST00000610780 2143 ntBASIC19.04■□□□□ 0.64
CDK7P50613 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CDK7P50613 AL135999.2-201ENST00000622438 1686 ntBASIC19.04■□□□□ 0.64
CDK7P50613 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
CDK7P50613 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK7P50613 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK7P50613 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CDK7P50613 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK7P50613 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK7P50613 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK7P50613 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK7P50613 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK7P50613 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK7P50613 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDK7P50613 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK7P50613 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK7P50613 AC079140.1-201ENST00000508039 487 ntBASIC19.03■□□□□ 0.64
CDK7P50613 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK7P50613 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK7P50613 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK7P50613 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK7P50613 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK7P50613 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CDK7P50613 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.02■□□□□ 0.64
CDK7P50613 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK7P50613 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK7P50613 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 GPS2P2-201ENST00000430745 888 ntBASIC19.02■□□□□ 0.64
CDK7P50613 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK7P50613 CNN2P2-201ENST00000443536 909 ntBASIC19.02■□□□□ 0.64
CDK7P50613 CNN2P3-201ENST00000450201 906 ntBASIC19.02■□□□□ 0.64
CDK7P50613 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.02■□□□□ 0.64
CDK7P50613 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDK7P50613 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK7P50613 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.02■□□□□ 0.64
CDK7P50613 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.02■□□□□ 0.64
CDK7P50613 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.02■□□□□ 0.64
CDK7P50613 AL136317.3-201ENST00000618497 906 ntBASIC19.02■□□□□ 0.64
CDK7P50613 AP001059.3-201ENST00000619053 235 ntBASIC19.02■□□□□ 0.64
CDK7P50613 AL645728.2-201ENST00000641974 660 ntBASIC19.02■□□□□ 0.64
CDK7P50613 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK7P50613 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.02■□□□□ 0.64
CDK7P50613 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.02■□□□□ 0.64
CDK7P50613 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.02■□□□□ 0.64
CDK7P50613 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.02■□□□□ 0.63
CDK7P50613 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CDK7P50613 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDK7P50613 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CDK7P50613 WIZP1-201ENST00000531444 2299 ntBASIC19.02■□□□□ 0.63
CDK7P50613 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CDK7P50613 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDK7P50613 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK7P50613 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDK7P50613 AC135776.1-201ENST00000319817 2481 ntBASIC19.01■□□□□ 0.63
CDK7P50613 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK7P50613 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK7P50613 AC135050.7-201ENST00000624508 2218 ntBASIC19.01■□□□□ 0.63
CDK7P50613 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK7P50613 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CDK7P50613 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK7P50613 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK7P50613 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDK7P50613 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK7P50613 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK7P50613 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK7P50613 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK7P50613 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDK7P50613 TFAMP1-201ENST00000412727 736 ntBASIC19.01■□□□□ 0.63
CDK7P50613 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.01■□□□□ 0.63
CDK7P50613 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK7P50613 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK7P50613 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK7P50613 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK7P50613 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDK7P50613 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms