Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.85■□□□□ 0.61
CASP4P49662 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.85■□□□□ 0.61
CASP4P49662 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CASP4P49662 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.85■□□□□ 0.61
CASP4P49662 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CASP4P49662 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.85■□□□□ 0.61
CASP4P49662 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CASP4P49662 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CASP4P49662 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.85■□□□□ 0.61
CASP4P49662 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.85■□□□□ 0.61
CASP4P49662 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.85■□□□□ 0.61
CASP4P49662 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.85■□□□□ 0.61
CASP4P49662 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.85■□□□□ 0.61
CASP4P49662 AL691432.3-201ENST00000621860 400 ntBASIC18.85■□□□□ 0.61
CASP4P49662 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CASP4P49662 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.85■□□□□ 0.61
CASP4P49662 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.85■□□□□ 0.61
CASP4P49662 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP4P49662 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.85■□□□□ 0.61
CASP4P49662 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 AL356309.3-201ENST00000624132 1934 ntBASIC18.84■□□□□ 0.61
CASP4P49662 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.84■□□□□ 0.61
CASP4P49662 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CASP4P49662 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CASP4P49662 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.84■□□□□ 0.61
CASP4P49662 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CASP4P49662 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.84■□□□□ 0.61
CASP4P49662 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.84■□□□□ 0.61
CASP4P49662 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.84■□□□□ 0.61
CASP4P49662 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.84■□□□□ 0.61
CASP4P49662 KRT126P-201ENST00000549467 1181 ntBASIC18.84■□□□□ 0.61
CASP4P49662 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.84■□□□□ 0.61
CASP4P49662 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.84■□□□□ 0.61
CASP4P49662 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 RN7SL510P-201ENST00000581311 263 ntBASIC18.84■□□□□ 0.61
CASP4P49662 LINC01711-201ENST00000598340 967 ntBASIC18.84■□□□□ 0.61
CASP4P49662 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.84■□□□□ 0.61
CASP4P49662 AC064862.7-201ENST00000604520 867 ntBASIC18.84■□□□□ 0.61
CASP4P49662 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.84■□□□□ 0.61
CASP4P49662 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 AC092068.3-201ENST00000587894 2016 ntBASIC18.84■□□□□ 0.61
CASP4P49662 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP4P49662 PRORSD1P-202ENST00000563365 2154 ntBASIC18.83■□□□□ 0.61
CASP4P49662 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CASP4P49662 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASP4P49662 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASP4P49662 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CASP4P49662 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASP4P49662 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.83■□□□□ 0.61
CASP4P49662 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CASP4P49662 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CASP4P49662 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASP4P49662 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASP4P49662 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.83■□□□□ 0.6
CASP4P49662 LINC00982-205ENST00000420957 435 ntBASIC18.83■□□□□ 0.6
CASP4P49662 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.83■□□□□ 0.6
CASP4P49662 PRYP5-201ENST00000451909 266 ntBASIC18.83■□□□□ 0.6
CASP4P49662 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CASP4P49662 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.83■□□□□ 0.6
CASP4P49662 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.83■□□□□ 0.6
CASP4P49662 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CASP4P49662 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.83■□□□□ 0.6
CASP4P49662 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.83■□□□□ 0.6
CASP4P49662 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.83■□□□□ 0.6
CASP4P49662 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.83■□□□□ 0.6
CASP4P49662 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP4P49662 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CASP4P49662 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms