Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA4P43681 LINC02012-201ENST00000608206 1725 ntBASIC17.46■□□□□ 0.39
CHRNA4P43681 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA4P43681 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA4P43681 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA4P43681 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA4P43681 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHRNA4P43681 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA4P43681 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA4P43681 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA4P43681 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA4P43681 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA4P43681 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 AC009053.2-201ENST00000563701 2365 ntBASIC17.45■□□□□ 0.38
CHRNA4P43681 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRNA4P43681 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 FGFR3P6-201ENST00000457012 610 ntBASIC17.45■□□□□ 0.38
CHRNA4P43681 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CHRNA4P43681 AF238378.1-201ENST00000526806 358 ntBASIC17.45■□□□□ 0.38
CHRNA4P43681 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA4P43681 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA4P43681 AC008608.2-201ENST00000606089 416 ntBASIC17.45■□□□□ 0.38
CHRNA4P43681 AL355877.3-201ENST00000622820 899 ntBASIC17.45■□□□□ 0.38
CHRNA4P43681 AC097637.2-201ENST00000624096 1997 ntBASIC17.45■□□□□ 0.38
CHRNA4P43681 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA4P43681 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA4P43681 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA4P43681 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA4P43681 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA4P43681 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHRNA4P43681 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA4P43681 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 AD000864.1-201ENST00000624076 2295 ntBASIC17.44■□□□□ 0.38
CHRNA4P43681 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 RBM17P3-201ENST00000417687 1192 ntBASIC17.44■□□□□ 0.38
CHRNA4P43681 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHRNA4P43681 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA4P43681 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 SART3-203ENST00000546611 1184 ntBASIC17.44■□□□□ 0.38
CHRNA4P43681 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA4P43681 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA4P43681 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHRNA4P43681 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA4P43681 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CHRNA4P43681 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA4P43681 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA4P43681 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA4P43681 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA4P43681 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA4P43681 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHRNA4P43681 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.43■□□□□ 0.38
CHRNA4P43681 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.43■□□□□ 0.38
CHRNA4P43681 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNA4P43681 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 AL356309.3-201ENST00000624132 1934 ntBASIC17.43■□□□□ 0.38
CHRNA4P43681 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNA4P43681 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA4P43681 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNA4P43681 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms