Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.77■■□□□ 1.08
COL15A1P39059 KRT18P32-201ENST00000424695 1287 ntBASIC21.77■■□□□ 1.08
COL15A1P39059 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.77■■□□□ 1.08
COL15A1P39059 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.77■■□□□ 1.08
COL15A1P39059 AC005237.2-201ENST00000434368 219 ntBASIC21.77■■□□□ 1.08
COL15A1P39059 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.77■■□□□ 1.08
COL15A1P39059 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.77■■□□□ 1.08
COL15A1P39059 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.77■■□□□ 1.08
COL15A1P39059 DUX4L27-201ENST00000554796 1261 ntBASIC21.77■■□□□ 1.08
COL15A1P39059 AJ011932.1-201ENST00000621707 465 ntBASIC21.77■■□□□ 1.08
COL15A1P39059 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.77■■□□□ 1.08
COL15A1P39059 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
COL15A1P39059 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.77■■□□□ 1.08
COL15A1P39059 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL15A1P39059 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
COL15A1P39059 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
COL15A1P39059 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.76■■□□□ 1.07
COL15A1P39059 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 CNN2P2-201ENST00000443536 909 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 CNN2P3-201ENST00000450201 906 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 AC093214.1-201ENST00000511688 1107 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 AC051619.7-201ENST00000568314 623 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.76■■□□□ 1.07
COL15A1P39059 AC138761.1-201ENST00000584393 385 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.76■■□□□ 1.07
COL15A1P39059 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.76■■□□□ 1.07
COL15A1P39059 AL136317.3-201ENST00000618497 906 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.76■■□□□ 1.07
COL15A1P39059 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
COL15A1P39059 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.76■■□□□ 1.07
COL15A1P39059 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
COL15A1P39059 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
COL15A1P39059 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL15A1P39059 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.76■■□□□ 1.07
COL15A1P39059 AC012317.2-201ENST00000623305 2251 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
COL15A1P39059 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.76■■□□□ 1.07
COL15A1P39059 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.76■■□□□ 1.07
COL15A1P39059 AC120498.9-201ENST00000339021 3867 ntBASIC21.76■■□□□ 1.07
COL15A1P39059 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.75■■□□□ 1.07
COL15A1P39059 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
COL15A1P39059 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 PMS2P4-201ENST00000412466 1052 ntBASIC21.75■■□□□ 1.07
COL15A1P39059 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COL15A1P39059 GPS2P2-201ENST00000430745 888 ntBASIC21.75■■□□□ 1.07
COL15A1P39059 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.75■■□□□ 1.07
COL15A1P39059 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.75■■□□□ 1.07
COL15A1P39059 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.75■■□□□ 1.07
COL15A1P39059 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.75■■□□□ 1.07
COL15A1P39059 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL15A1P39059 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COL15A1P39059 NOC2LP2-201ENST00000407594 1944 ntBASIC21.75■■□□□ 1.07
COL15A1P39059 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
COL15A1P39059 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 TFAMP1-201ENST00000412727 736 ntBASIC21.74■■□□□ 1.07
COL15A1P39059 FAM58DP-201ENST00000428076 619 ntBASIC21.74■■□□□ 1.07
COL15A1P39059 AL592309.1-201ENST00000443127 649 ntBASIC21.74■■□□□ 1.07
COL15A1P39059 AC069335.1-201ENST00000489972 472 ntBASIC21.74■■□□□ 1.07
COL15A1P39059 AC069262.1-201ENST00000539058 672 ntBASIC21.74■■□□□ 1.07
COL15A1P39059 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.74■■□□□ 1.07
COL15A1P39059 AC243562.1-201ENST00000560672 389 ntBASIC21.74■■□□□ 1.07
COL15A1P39059 RARRES2P8-201ENST00000566335 367 ntBASIC21.74■■□□□ 1.07
COL15A1P39059 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.74■■□□□ 1.07
COL15A1P39059 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.74■■□□□ 1.07
COL15A1P39059 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.74■■□□□ 1.07
COL15A1P39059 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
COL15A1P39059 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COL15A1P39059 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL15A1P39059 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms