Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCLP35914 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGCLP35914 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGCLP35914 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.2■□□□□ 0.34
HMGCLP35914 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCLP35914 AL662844.1-201ENST00000546340 181 ntBASIC17.2■□□□□ 0.34
HMGCLP35914 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HMGCLP35914 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGCLP35914 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGCLP35914 AL773604.1-201ENST00000617417 272 ntBASIC17.2■□□□□ 0.34
HMGCLP35914 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCLP35914 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HMGCLP35914 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCLP35914 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCLP35914 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGCLP35914 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HMGCLP35914 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCLP35914 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCLP35914 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCLP35914 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCLP35914 KRT18P27-201ENST00000427733 1299 ntBASIC17.19■□□□□ 0.34
HMGCLP35914 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCLP35914 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGCLP35914 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.19■□□□□ 0.34
HMGCLP35914 AC008735.5-201ENST00000623544 497 ntBASIC17.19■□□□□ 0.34
HMGCLP35914 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HMGCLP35914 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCLP35914 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HMGCLP35914 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HMGCLP35914 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 AC073621.1-201ENST00000392730 636 ntBASIC17.18■□□□□ 0.34
HMGCLP35914 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 MRPL3P1-201ENST00000400109 1033 ntBASIC17.18■□□□□ 0.34
HMGCLP35914 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 AC124947.2-201ENST00000547118 1133 ntBASIC17.18■□□□□ 0.34
HMGCLP35914 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.18■□□□□ 0.34
HMGCLP35914 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 SLC25A6P4-201ENST00000586535 553 ntBASIC17.18■□□□□ 0.34
HMGCLP35914 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HMGCLP35914 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.18■□□□□ 0.34
HMGCLP35914 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HMGCLP35914 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGCLP35914 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGCLP35914 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGCLP35914 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGCLP35914 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms