Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXA10P31260 AC092580.3-201ENST00000430932 139 ntBASIC20.93■□□□□ 0.94
HOXA10P31260 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXA10P31260 AC069120.2-201ENST00000524091 540 ntBASIC20.93■□□□□ 0.94
HOXA10P31260 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 AC091167.2-201ENST00000579581 588 ntBASIC20.93■□□□□ 0.94
HOXA10P31260 AC027307.2-201ENST00000591252 911 ntBASIC20.93■□□□□ 0.94
HOXA10P31260 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXA10P31260 ABALON-201ENST00000629058 1903 ntBASIC20.93■□□□□ 0.94
HOXA10P31260 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXA10P31260 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXA10P31260 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HOXA10P31260 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA10P31260 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HOXA10P31260 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA10P31260 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXA10P31260 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA10P31260 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXA10P31260 GNAS-203ENST00000306120 1878 ntBASIC20.92■□□□□ 0.94
HOXA10P31260 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXA10P31260 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA10P31260 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXA10P31260 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA10P31260 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HOXA10P31260 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXA10P31260 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HOXA10P31260 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA10P31260 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXA10P31260 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXA10P31260 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXA10P31260 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
HOXA10P31260 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HOXA10P31260 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.91■□□□□ 0.94
HOXA10P31260 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.91■□□□□ 0.94
HOXA10P31260 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
HOXA10P31260 TOP3BP1-201ENST00000420768 1380 ntBASIC20.91■□□□□ 0.94
HOXA10P31260 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HOXA10P31260 GAPDHP21-201ENST00000450301 1010 ntBASIC20.91■□□□□ 0.94
HOXA10P31260 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.91■□□□□ 0.94
HOXA10P31260 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.91■□□□□ 0.94
HOXA10P31260 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXA10P31260 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 AL031055.1-201ENST00000606362 631 ntBASIC20.91■□□□□ 0.94
HOXA10P31260 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.91■□□□□ 0.94
HOXA10P31260 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HOXA10P31260 MIR6080-201ENST00000617359 66 ntBASIC20.91■□□□□ 0.94
HOXA10P31260 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXA10P31260 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA10P31260 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
HOXA10P31260 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
HOXA10P31260 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA10P31260 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HOXA10P31260 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA10P31260 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA10P31260 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA10P31260 RNF165-205ENST00000588679 2904 ntBASIC20.89■□□□□ 0.94
HOXA10P31260 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA10P31260 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA10P31260 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA10P31260 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA10P31260 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA10P31260 BICD1-207ENST00000551848 1962 ntBASIC20.89■□□□□ 0.93
HOXA10P31260 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms