Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-FP30511 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HLA-FP30511 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-FP30511 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-FP30511 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-FP30511 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-FP30511 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-FP30511 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-FP30511 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-FP30511 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HLA-FP30511 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-FP30511 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
HLA-FP30511 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-FP30511 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.49■□□□□ 0.39
HLA-FP30511 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-FP30511 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-FP30511 ACTL9-202ENST00000612068 1252 ntBASIC17.49■□□□□ 0.39
HLA-FP30511 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-FP30511 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-FP30511 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.49■□□□□ 0.39
HLA-FP30511 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-FP30511 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-FP30511 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-FP30511 AL138688.1-201ENST00000624851 1594 ntBASIC17.49■□□□□ 0.39
HLA-FP30511 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-FP30511 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
HLA-FP30511 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-FP30511 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-FP30511 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 AC004967.1-201ENST00000453589 447 ntBASIC17.48■□□□□ 0.39
HLA-FP30511 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 AC023141.13-201ENST00000604991 943 ntBASIC17.48■□□□□ 0.39
HLA-FP30511 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 AC134684.3-201ENST00000641758 218 ntBASIC17.48■□□□□ 0.39
HLA-FP30511 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.48■□□□□ 0.39
HLA-FP30511 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-FP30511 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-FP30511 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-FP30511 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-FP30511 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-FP30511 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-FP30511 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HLA-FP30511 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-FP30511 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 SLC25A1P3-201ENST00000395415 828 ntBASIC17.47■□□□□ 0.39
HLA-FP30511 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.47■□□□□ 0.39
HLA-FP30511 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.47■□□□□ 0.39
HLA-FP30511 YBX1P5-201ENST00000509441 847 ntBASIC17.47■□□□□ 0.39
HLA-FP30511 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
HLA-FP30511 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-FP30511 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-FP30511 AC005829.1-201ENST00000570002 483 ntBASIC17.47■□□□□ 0.39
HLA-FP30511 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
HLA-FP30511 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-FP30511 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-FP30511 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-FP30511 C20orf181-201ENST00000623918 480 ntBASIC17.47■□□□□ 0.39
HLA-FP30511 AC007064.4-201ENST00000637740 555 ntBASIC17.47■□□□□ 0.39
HLA-FP30511 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-FP30511 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-FP30511 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms