Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRD2P25440 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRD2P25440 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BRD2P25440 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRD2P25440 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
BRD2P25440 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.62■□□□□ 0.57
BRD2P25440 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BRD2P25440 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.61■□□□□ 0.57
BRD2P25440 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
BRD2P25440 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.61■□□□□ 0.57
BRD2P25440 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 MYCLP1-201ENST00000372451 1075 ntBASIC18.61■□□□□ 0.57
BRD2P25440 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BRD2P25440 TSPY19P-201ENST00000418461 509 ntBASIC18.61■□□□□ 0.57
BRD2P25440 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.61■□□□□ 0.57
BRD2P25440 TSPY18P-201ENST00000441642 509 ntBASIC18.61■□□□□ 0.57
BRD2P25440 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.61■□□□□ 0.57
BRD2P25440 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.61■□□□□ 0.57
BRD2P25440 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.61■□□□□ 0.57
BRD2P25440 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.61■□□□□ 0.57
BRD2P25440 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.61■□□□□ 0.57
BRD2P25440 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BRD2P25440 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.61■□□□□ 0.57
BRD2P25440 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.61■□□□□ 0.57
BRD2P25440 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BRD2P25440 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRD2P25440 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 AC108860.2-201ENST00000562760 2183 ntBASIC18.6■□□□□ 0.57
BRD2P25440 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BRD2P25440 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.6■□□□□ 0.57
BRD2P25440 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 AC132008.2-207ENST00000454517 770 ntBASIC18.6■□□□□ 0.57
BRD2P25440 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.6■□□□□ 0.57
BRD2P25440 AP001269.4-201ENST00000609611 512 ntBASIC18.6■□□□□ 0.57
BRD2P25440 AL121772.3-201ENST00000610840 674 ntBASIC18.6■□□□□ 0.57
BRD2P25440 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.6■□□□□ 0.57
BRD2P25440 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.6■□□□□ 0.57
BRD2P25440 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRD2P25440 PMPCAP1-201ENST00000508114 1576 ntBASIC18.59■□□□□ 0.57
BRD2P25440 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.59■□□□□ 0.57
BRD2P25440 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.59■□□□□ 0.57
BRD2P25440 KLF4P1-201ENST00000412782 1185 ntBASIC18.59■□□□□ 0.57
BRD2P25440 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.59■□□□□ 0.57
BRD2P25440 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.59■□□□□ 0.57
BRD2P25440 ABCD1P5-201ENST00000445663 754 ntBASIC18.59■□□□□ 0.57
BRD2P25440 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.59■□□□□ 0.57
BRD2P25440 AP000867.4-201ENST00000641616 219 ntBASIC18.59■□□□□ 0.57
BRD2P25440 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRD2P25440 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms