Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSR1P21757 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSR1P21757 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSR1P21757 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSR1P21757 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSR1P21757 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.31■□□□□ 0.04
MSR1P21757 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.31■□□□□ 0.04
MSR1P21757 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.31■□□□□ 0.04
MSR1P21757 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MSR1P21757 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.31■□□□□ 0.04
MSR1P21757 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
MSR1P21757 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.31■□□□□ 0.04
MSR1P21757 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.31■□□□□ 0.04
MSR1P21757 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MSR1P21757 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MSR1P21757 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
MSR1P21757 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MSR1P21757 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 AC093525.9-201ENST00000624961 1746 ntBASIC15.31■□□□□ 0.04
MSR1P21757 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSR1P21757 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.31■□□□□ 0.04
MSR1P21757 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 AC012313.1-201ENST00000593393 3059 ntBASIC15.3■□□□□ 0.04
MSR1P21757 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MSR1P21757 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
MSR1P21757 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
MSR1P21757 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.3■□□□□ 0.04
MSR1P21757 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MSR1P21757 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.3■□□□□ 0.04
MSR1P21757 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.3■□□□□ 0.04
MSR1P21757 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.3■□□□□ 0.04
MSR1P21757 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.3■□□□□ 0.04
MSR1P21757 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 AC138894.3-201ENST00000603787 634 ntBASIC15.3■□□□□ 0.04
MSR1P21757 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.3■□□□□ 0.04
MSR1P21757 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.3■□□□□ 0.04
MSR1P21757 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.3■□□□□ 0.04
MSR1P21757 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.3■□□□□ 0.04
MSR1P21757 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MSR1P21757 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSR1P21757 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MSR1P21757 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.3■□□□□ 0.04
MSR1P21757 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 PMPCAP1-201ENST00000508114 1576 ntBASIC15.29■□□□□ 0.04
MSR1P21757 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.29■□□□□ 0.04
MSR1P21757 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.29■□□□□ 0.04
MSR1P21757 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 KRT16P4-201ENST00000453883 522 ntBASIC15.29■□□□□ 0.04
MSR1P21757 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms