Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS1P17812 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS1P17812 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS1P17812 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS1P17812 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.41■□□□□ 0.38
CTPS1P17812 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS1P17812 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS1P17812 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTPS1P17812 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS1P17812 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTPS1P17812 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CTPS1P17812 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
CTPS1P17812 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.4■□□□□ 0.38
CTPS1P17812 AC012640.2-201ENST00000561606 901 ntBASIC17.4■□□□□ 0.38
CTPS1P17812 AC139887.3-201ENST00000568585 713 ntBASIC17.4■□□□□ 0.38
CTPS1P17812 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS1P17812 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS1P17812 FAM215A-202ENST00000632077 792 ntBASIC17.4■□□□□ 0.38
CTPS1P17812 AC107918.4-202ENST00000641623 219 ntBASIC17.4■□□□□ 0.38
CTPS1P17812 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CTPS1P17812 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTPS1P17812 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS1P17812 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS1P17812 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTPS1P17812 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTPS1P17812 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CTPS1P17812 NCF1C-201ENST00000438382 1427 ntBASIC17.39■□□□□ 0.38
CTPS1P17812 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS1P17812 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.39■□□□□ 0.37
CTPS1P17812 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS1P17812 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.39■□□□□ 0.37
CTPS1P17812 RNA5SP419-201ENST00000515908 135 ntBASIC17.39■□□□□ 0.37
CTPS1P17812 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.39■□□□□ 0.37
CTPS1P17812 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS1P17812 AL662844.1-201ENST00000546340 181 ntBASIC17.39■□□□□ 0.37
CTPS1P17812 AP001005.1-201ENST00000571755 1248 ntBASIC17.39■□□□□ 0.37
CTPS1P17812 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.39■□□□□ 0.37
CTPS1P17812 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 MIR7706-201ENST00000613747 67 ntBASIC17.39■□□□□ 0.37
CTPS1P17812 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.39■□□□□ 0.37
CTPS1P17812 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.39■□□□□ 0.37
CTPS1P17812 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CTPS1P17812 HLA-A-201ENST00000376802 1334 ntBASIC17.39■□□□□ 0.37
CTPS1P17812 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS1P17812 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTPS1P17812 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
CTPS1P17812 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS1P17812 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS1P17812 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.38■□□□□ 0.37
CTPS1P17812 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTPS1P17812 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.38■□□□□ 0.37
CTPS1P17812 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTPS1P17812 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CTPS1P17812 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.38■□□□□ 0.37
CTPS1P17812 LAGE3P1-201ENST00000425356 484 ntBASIC17.38■□□□□ 0.37
CTPS1P17812 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.38■□□□□ 0.37
CTPS1P17812 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.38■□□□□ 0.37
CTPS1P17812 AL589182.2-201ENST00000619332 1049 ntBASIC17.38■□□□□ 0.37
CTPS1P17812 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTPS1P17812 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTPS1P17812 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CTPS1P17812 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.38■□□□□ 0.37
CTPS1P17812 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS1P17812 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms