Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.05■□□□□ 0.64
GAP43P17677 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GAP43P17677 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 AL139424.1-201ENST00000607572 797 ntBASIC19.05■□□□□ 0.64
GAP43P17677 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.05■□□□□ 0.64
GAP43P17677 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GAP43P17677 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.05■□□□□ 0.64
GAP43P17677 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
GAP43P17677 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.05■□□□□ 0.64
GAP43P17677 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GAP43P17677 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GAP43P17677 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GAP43P17677 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GAP43P17677 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAP43P17677 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
GAP43P17677 AC073648.2-201ENST00000510116 352 ntBASIC19.04■□□□□ 0.64
GAP43P17677 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.04■□□□□ 0.64
GAP43P17677 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.04■□□□□ 0.64
GAP43P17677 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAP43P17677 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.04■□□□□ 0.64
GAP43P17677 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.03■□□□□ 0.64
GAP43P17677 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GAP43P17677 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
GAP43P17677 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.03■□□□□ 0.64
GAP43P17677 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.03■□□□□ 0.64
GAP43P17677 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.03■□□□□ 0.64
GAP43P17677 LAGE3P1-201ENST00000425356 484 ntBASIC19.03■□□□□ 0.64
GAP43P17677 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.03■□□□□ 0.64
GAP43P17677 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.03■□□□□ 0.64
GAP43P17677 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.03■□□□□ 0.64
GAP43P17677 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.03■□□□□ 0.64
GAP43P17677 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.03■□□□□ 0.64
GAP43P17677 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAP43P17677 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GAP43P17677 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.02■□□□□ 0.64
GAP43P17677 AL590787.1-201ENST00000568856 1315 ntBASIC19.02■□□□□ 0.64
GAP43P17677 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.02■□□□□ 0.64
GAP43P17677 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.02■□□□□ 0.64
GAP43P17677 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GAP43P17677 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.02■□□□□ 0.64
GAP43P17677 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms