Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CDH1P12830 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH1P12830 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CDH1P12830 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH1P12830 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.89■□□□□ 0.3
CDH1P12830 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH1P12830 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH1P12830 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH1P12830 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH1P12830 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH1P12830 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH1P12830 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH1P12830 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH1P12830 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 MYCLP1-201ENST00000372451 1075 ntBASIC16.89■□□□□ 0.29
CDH1P12830 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH1P12830 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH1P12830 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH1P12830 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CDH1P12830 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH1P12830 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.89■□□□□ 0.29
CDH1P12830 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH1P12830 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.89■□□□□ 0.29
CDH1P12830 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH1P12830 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH1P12830 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH1P12830 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH1P12830 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH1P12830 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH1P12830 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH1P12830 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH1P12830 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 AL353593.2-201ENST00000602529 1483 ntBASIC16.88■□□□□ 0.29
CDH1P12830 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDH1P12830 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CDH1P12830 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDH1P12830 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH1P12830 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH1P12830 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH1P12830 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH1P12830 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH1P12830 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH1P12830 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.88■□□□□ 0.29
CDH1P12830 AL732292.2-201ENST00000609649 430 ntBASIC16.88■□□□□ 0.29
CDH1P12830 AL121772.3-201ENST00000610840 674 ntBASIC16.88■□□□□ 0.29
CDH1P12830 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH1P12830 AD001527.2-201ENST00000622994 785 ntBASIC16.88■□□□□ 0.29
CDH1P12830 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH1P12830 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH1P12830 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH1P12830 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH1P12830 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDH1P12830 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDH1P12830 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDH1P12830 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH1P12830 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms