Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.47■■□□□ 1.19
COL5A2P05997 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL5A2P05997 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 CU639417.3-201ENST00000624240 1404 ntBASIC22.47■■□□□ 1.19
COL5A2P05997 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC22.47■■□□□ 1.19
COL5A2P05997 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
COL5A2P05997 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.47■■□□□ 1.19
COL5A2P05997 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC22.47■■□□□ 1.19
COL5A2P05997 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
COL5A2P05997 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 FOXO1B-201ENST00000504678 1527 ntBASIC22.46■■□□□ 1.19
COL5A2P05997 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC22.46■■□□□ 1.19
COL5A2P05997 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 AC138028.4-201ENST00000564984 1845 ntBASIC22.46■■□□□ 1.19
COL5A2P05997 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL5A2P05997 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.46■■□□□ 1.19
COL5A2P05997 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.46■■□□□ 1.19
COL5A2P05997 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC22.46■■□□□ 1.19
COL5A2P05997 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
COL5A2P05997 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL5A2P05997 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC22.45■■□□□ 1.18
COL5A2P05997 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.45■■□□□ 1.18
COL5A2P05997 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
COL5A2P05997 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
COL5A2P05997 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
COL5A2P05997 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.45■■□□□ 1.18
COL5A2P05997 ARSEP1-201ENST00000420443 635 ntBASIC22.45■■□□□ 1.18
COL5A2P05997 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.45■■□□□ 1.18
COL5A2P05997 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.45■■□□□ 1.18
COL5A2P05997 AC105233.2-201ENST00000523697 349 ntBASIC22.45■■□□□ 1.18
COL5A2P05997 AF228730.5-201ENST00000530288 346 ntBASIC22.45■■□□□ 1.18
COL5A2P05997 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC22.45■■□□□ 1.18
COL5A2P05997 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC22.45■■□□□ 1.18
COL5A2P05997 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 AC004233.3-201ENST00000607794 1269 ntBASIC22.45■■□□□ 1.18
COL5A2P05997 AC018529.1-201ENST00000613063 361 ntBASIC22.45■■□□□ 1.18
COL5A2P05997 SERF2-217ENST00000630046 862 ntTSL 5 BASIC22.45■■□□□ 1.18
COL5A2P05997 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
COL5A2P05997 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
COL5A2P05997 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL5A2P05997 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.45■■□□□ 1.18
COL5A2P05997 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.44■■□□□ 1.18
COL5A2P05997 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC22.44■■□□□ 1.18
COL5A2P05997 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
COL5A2P05997 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL5A2P05997 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.44■■□□□ 1.18
COL5A2P05997 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL5A2P05997 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.44■■□□□ 1.18
COL5A2P05997 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
COL5A2P05997 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.44■■□□□ 1.18
COL5A2P05997 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
COL5A2P05997 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL5A2P05997 ATP5G2P4-201ENST00000442175 420 ntBASIC22.44■■□□□ 1.18
COL5A2P05997 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC22.44■■□□□ 1.18
COL5A2P05997 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.44■■□□□ 1.18
COL5A2P05997 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL5A2P05997 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
COL5A2P05997 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL5A2P05997 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.44■■□□□ 1.18
COL5A2P05997 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
COL5A2P05997 AP000974.1-201ENST00000623909 2387 ntBASIC22.44■■□□□ 1.18
COL5A2P05997 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.44■■□□□ 1.18
COL5A2P05997 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL5A2P05997 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.44■■□□□ 1.18
COL5A2P05997 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.44■■□□□ 1.18
COL5A2P05997 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL5A2P05997 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.43■■□□□ 1.18
COL5A2P05997 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.43■■□□□ 1.18
COL5A2P05997 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC22.43■■□□□ 1.18
COL5A2P05997 AC093503.3-201ENST00000624917 2352 ntBASIC22.43■■□□□ 1.18
COL5A2P05997 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC22.43■■□□□ 1.18
COL5A2P05997 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC22.43■■□□□ 1.18
COL5A2P05997 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL5A2P05997 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.43■■□□□ 1.18
COL5A2P05997 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
COL5A2P05997 AC073389.1-201ENST00000595595 795 ntBASIC22.43■■□□□ 1.18
COL5A2P05997 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC22.43■■□□□ 1.18
COL5A2P05997 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms