Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 AC073648.2-201ENST00000510116 352 ntBASIC18.59■□□□□ 0.57
HLA-DRAP01903 AC139887.3-201ENST00000568585 713 ntBASIC18.59■□□□□ 0.57
HLA-DRAP01903 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRAP01903 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DRAP01903 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
HLA-DRAP01903 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
HLA-DRAP01903 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HLA-DRAP01903 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.58■□□□□ 0.57
HLA-DRAP01903 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DRAP01903 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
HLA-DRAP01903 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
HLA-DRAP01903 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DRAP01903 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DRAP01903 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 RPS2P1-201ENST00000434010 821 ntBASIC18.58■□□□□ 0.56
HLA-DRAP01903 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 LTB4R2-202ENST00000528054 3092 ntBASIC18.58■□□□□ 0.56
HLA-DRAP01903 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-DRAP01903 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRAP01903 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 AC080080.1-201ENST00000625121 2420 ntBASIC18.57■□□□□ 0.56
HLA-DRAP01903 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 HNRNPDP1-201ENST00000439535 754 ntBASIC18.57■□□□□ 0.56
HLA-DRAP01903 AC018712.1-201ENST00000455767 687 ntBASIC18.57■□□□□ 0.56
HLA-DRAP01903 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 AP002469.2-201ENST00000531724 424 ntBASIC18.57■□□□□ 0.56
HLA-DRAP01903 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 AL139424.1-201ENST00000607572 797 ntBASIC18.57■□□□□ 0.56
HLA-DRAP01903 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 AC148477.8-201ENST00000624298 468 ntBASIC18.57■□□□□ 0.56
HLA-DRAP01903 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DRAP01903 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRAP01903 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms