Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFBP01127 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFBP01127 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFBP01127 AC012569.1-201ENST00000591191 1524 ntBASIC17.22■□□□□ 0.35
PDGFBP01127 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PDGFBP01127 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 AC098614.1-201ENST00000368528 745 ntBASIC17.22■□□□□ 0.35
PDGFBP01127 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PDGFBP01127 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFBP01127 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 AC009477.1-201ENST00000452936 217 ntBASIC17.22■□□□□ 0.35
PDGFBP01127 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFBP01127 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PDGFBP01127 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFBP01127 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.22■□□□□ 0.35
PDGFBP01127 AL138918.1-201ENST00000568306 659 ntBASIC17.22■□□□□ 0.35
PDGFBP01127 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFBP01127 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFBP01127 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFBP01127 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PDGFBP01127 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFBP01127 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFBP01127 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 RNF165-205ENST00000588679 2904 ntBASIC17.21■□□□□ 0.35
PDGFBP01127 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFBP01127 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFBP01127 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFBP01127 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFBP01127 AL512384.1-201ENST00000406683 331 ntBASIC17.21■□□□□ 0.35
PDGFBP01127 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PDGFBP01127 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFBP01127 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.21■□□□□ 0.35
PDGFBP01127 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDGFBP01127 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.21■□□□□ 0.35
PDGFBP01127 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.21■□□□□ 0.35
PDGFBP01127 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFBP01127 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.21■□□□□ 0.35
PDGFBP01127 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFBP01127 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 AC109635.5-201ENST00000533593 962 ntBASIC17.21■□□□□ 0.35
PDGFBP01127 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.21■□□□□ 0.35
PDGFBP01127 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFBP01127 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFBP01127 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFBP01127 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PDGFBP01127 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PDGFBP01127 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDGFBP01127 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFBP01127 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFBP01127 AL353779.1-201ENST00000434793 351 ntBASIC17.2■□□□□ 0.34
PDGFBP01127 GNAQP1-201ENST00000444815 1067 ntBASIC17.2■□□□□ 0.34
PDGFBP01127 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 RN7SL752P-201ENST00000463779 287 ntBASIC17.2■□□□□ 0.34
PDGFBP01127 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFBP01127 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFBP01127 KRT17P8-201ENST00000540749 863 ntBASIC17.2■□□□□ 0.34
PDGFBP01127 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFBP01127 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFBP01127 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFBP01127 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFBP01127 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PDGFBP01127 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDGFBP01127 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PDGFBP01127 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFBP01127 AC018529.1-201ENST00000613063 361 ntBASIC17.2■□□□□ 0.34
PDGFBP01127 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PDGFBP01127 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PDGFBP01127 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFBP01127 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PDGFBP01127 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms