Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
GFRA3O60609 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 MIR663B-201ENST00000408361 115 ntBASIC16.63■□□□□ 0.25
GFRA3O60609 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
GFRA3O60609 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.63■□□□□ 0.25
GFRA3O60609 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.63■□□□□ 0.25
GFRA3O60609 AC055876.2-201ENST00000531834 546 ntBASIC16.63■□□□□ 0.25
GFRA3O60609 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.63■□□□□ 0.25
GFRA3O60609 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.63■□□□□ 0.25
GFRA3O60609 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 SLC7A15P-201ENST00000424028 1363 ntBASIC16.63■□□□□ 0.25
GFRA3O60609 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.63■□□□□ 0.25
GFRA3O60609 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.62■□□□□ 0.25
GFRA3O60609 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.62■□□□□ 0.25
GFRA3O60609 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.62■□□□□ 0.25
GFRA3O60609 MYCLP2-201ENST00000449268 967 ntBASIC16.62■□□□□ 0.25
GFRA3O60609 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC16.62■□□□□ 0.25
GFRA3O60609 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.62■□□□□ 0.25
GFRA3O60609 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.62■□□□□ 0.25
GFRA3O60609 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.62■□□□□ 0.25
GFRA3O60609 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 AL589739.1-201ENST00000607720 493 ntBASIC16.62■□□□□ 0.25
GFRA3O60609 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GFRA3O60609 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GFRA3O60609 AP3S2-216ENST00000617003 1561 ntBASIC16.62■□□□□ 0.25
GFRA3O60609 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
GFRA3O60609 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFRA3O60609 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.61■□□□□ 0.25
GFRA3O60609 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.61■□□□□ 0.25
GFRA3O60609 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 MTND6P24-201ENST00000440466 518 ntBASIC16.61■□□□□ 0.25
GFRA3O60609 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.61■□□□□ 0.25
GFRA3O60609 MPRIPP1-201ENST00000452433 1089 ntBASIC16.61■□□□□ 0.25
GFRA3O60609 PFN1P12-201ENST00000455938 534 ntBASIC16.61■□□□□ 0.25
GFRA3O60609 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.61■□□□□ 0.25
GFRA3O60609 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.61■□□□□ 0.25
GFRA3O60609 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.61■□□□□ 0.25
GFRA3O60609 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.61■□□□□ 0.25
GFRA3O60609 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
GFRA3O60609 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.61■□□□□ 0.25
GFRA3O60609 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.61■□□□□ 0.25
GFRA3O60609 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.61■□□□□ 0.25
GFRA3O60609 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GFRA3O60609 AC012569.1-201ENST00000591191 1524 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms