Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.53■□□□□ 0.24
DUX1O43812 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX1O43812 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.53■□□□□ 0.24
DUX1O43812 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX1O43812 AC087163.2-201ENST00000457299 853 ntBASIC16.53■□□□□ 0.24
DUX1O43812 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX1O43812 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX1O43812 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX1O43812 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.53■□□□□ 0.24
DUX1O43812 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.53■□□□□ 0.24
DUX1O43812 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX1O43812 AL596442.2-201ENST00000610240 980 ntBASIC16.53■□□□□ 0.24
DUX1O43812 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
DUX1O43812 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
DUX1O43812 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
DUX1O43812 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 ELL2P1-201ENST00000413990 1906 ntBASIC16.53■□□□□ 0.24
DUX1O43812 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX1O43812 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX1O43812 AC129492.6-201ENST00000611383 1305 ntBASIC16.52■□□□□ 0.24
DUX1O43812 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
DUX1O43812 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX1O43812 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX1O43812 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX1O43812 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX1O43812 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX1O43812 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
DUX1O43812 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX1O43812 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX1O43812 AC254562.1-201ENST00000417586 456 ntBASIC16.52■□□□□ 0.24
DUX1O43812 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX1O43812 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 FAM185BP-201ENST00000443595 716 ntBASIC16.52■□□□□ 0.24
DUX1O43812 CEND1P1-201ENST00000451006 455 ntBASIC16.52■□□□□ 0.24
DUX1O43812 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.52■□□□□ 0.24
DUX1O43812 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX1O43812 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.52■□□□□ 0.24
DUX1O43812 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX1O43812 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
DUX1O43812 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
DUX1O43812 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
DUX1O43812 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
DUX1O43812 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
DUX1O43812 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
DUX1O43812 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DUX1O43812 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
DUX1O43812 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.52■□□□□ 0.23
DUX1O43812 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
DUX1O43812 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
DUX1O43812 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DUX1O43812 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
DUX1O43812 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
DUX1O43812 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
DUX1O43812 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
DUX1O43812 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.51■□□□□ 0.23
DUX1O43812 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
DUX1O43812 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.51■□□□□ 0.23
DUX1O43812 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
DUX1O43812 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
DUX1O43812 FAM58CP-201ENST00000435741 640 ntBASIC16.51■□□□□ 0.23
DUX1O43812 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.51■□□□□ 0.23
DUX1O43812 ACTG1P14-201ENST00000446382 1122 ntBASIC16.51■□□□□ 0.23
DUX1O43812 AL513480.1-201ENST00000451731 511 ntBASIC16.51■□□□□ 0.23
DUX1O43812 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.51■□□□□ 0.23
DUX1O43812 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX1O43812 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
DUX1O43812 AC068137.2-201ENST00000605408 478 ntBASIC16.51■□□□□ 0.23
DUX1O43812 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.51■□□□□ 0.23
DUX1O43812 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.51■□□□□ 0.23
DUX1O43812 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms