Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.36■□□□□ 0.05
SGCEO43556 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.36■□□□□ 0.05
SGCEO43556 KRT17P6-201ENST00000453795 1220 ntBASIC15.36■□□□□ 0.05
SGCEO43556 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.36■□□□□ 0.05
SGCEO43556 AC111152.3-201ENST00000569699 673 ntBASIC15.36■□□□□ 0.05
SGCEO43556 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 AC109462.3-201ENST00000573934 613 ntBASIC15.36■□□□□ 0.05
SGCEO43556 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.36■□□□□ 0.05
SGCEO43556 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.36■□□□□ 0.05
SGCEO43556 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SGCEO43556 AL139327.4-201ENST00000612362 153 ntBASIC15.36■□□□□ 0.05
SGCEO43556 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.36■□□□□ 0.05
SGCEO43556 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
SGCEO43556 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
SGCEO43556 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
SGCEO43556 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.36■□□□□ 0.05
SGCEO43556 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.36■□□□□ 0.05
SGCEO43556 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGCEO43556 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SGCEO43556 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SGCEO43556 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SGCEO43556 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.35■□□□□ 0.05
SGCEO43556 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SGCEO43556 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.35■□□□□ 0.05
SGCEO43556 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SGCEO43556 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SGCEO43556 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.35■□□□□ 0.05
SGCEO43556 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.35■□□□□ 0.05
SGCEO43556 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.35■□□□□ 0.05
SGCEO43556 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.35■□□□□ 0.05
SGCEO43556 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.35■□□□□ 0.05
SGCEO43556 AC019129.2-201ENST00000609837 1235 ntBASIC15.35■□□□□ 0.05
SGCEO43556 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.35■□□□□ 0.05
SGCEO43556 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.35■□□□□ 0.05
SGCEO43556 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.35■□□□□ 0.05
SGCEO43556 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SGCEO43556 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGCEO43556 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.34■□□□□ 0.05
SGCEO43556 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SGCEO43556 NSUN5P1-202ENST00000421140 1535 ntBASIC15.34■□□□□ 0.05
SGCEO43556 NSUN5P2-203ENST00000457352 1529 ntBASIC15.34■□□□□ 0.05
SGCEO43556 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.34■□□□□ 0.05
SGCEO43556 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SGCEO43556 ATP5G2P1-201ENST00000433580 426 ntBASIC15.34■□□□□ 0.05
SGCEO43556 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.34■□□□□ 0.05
SGCEO43556 AC104819.1-201ENST00000504587 486 ntBASIC15.34■□□□□ 0.05
SGCEO43556 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.34■□□□□ 0.05
SGCEO43556 AP000867.3-201ENST00000524675 377 ntBASIC15.34■□□□□ 0.05
SGCEO43556 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.34■□□□□ 0.05
SGCEO43556 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.34■□□□□ 0.05
SGCEO43556 AC074051.2-201ENST00000565115 352 ntBASIC15.34■□□□□ 0.05
SGCEO43556 MIR3180-1-201ENST00000580374 94 ntBASIC15.34■□□□□ 0.05
SGCEO43556 MIR3180-3-201ENST00000584616 94 ntBASIC15.34■□□□□ 0.05
SGCEO43556 AC011467.2-201ENST00000598425 242 ntBASIC15.34■□□□□ 0.05
SGCEO43556 NPAP1P7-201ENST00000613027 823 ntBASIC15.34■□□□□ 0.05
SGCEO43556 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 AC093458.2-201ENST00000623150 629 ntBASIC15.34■□□□□ 0.05
SGCEO43556 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.34■□□□□ 0.05
SGCEO43556 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.34■□□□□ 0.05
SGCEO43556 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SGCEO43556 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms