Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PCDHA14-201ENST00000506751 2298 ntBASIC17.24■□□□□ 0.35
PHGDHO43175 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.24■□□□□ 0.35
PHGDHO43175 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.24■□□□□ 0.35
PHGDHO43175 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PHGDHO43175 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.24■□□□□ 0.35
PHGDHO43175 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.24■□□□□ 0.35
PHGDHO43175 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.24■□□□□ 0.35
PHGDHO43175 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.24■□□□□ 0.35
PHGDHO43175 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.24■□□□□ 0.35
PHGDHO43175 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.24■□□□□ 0.35
PHGDHO43175 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
PHGDHO43175 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.24■□□□□ 0.35
PHGDHO43175 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PHGDHO43175 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.24■□□□□ 0.35
PHGDHO43175 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHGDHO43175 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PHGDHO43175 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.23■□□□□ 0.35
PHGDHO43175 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.23■□□□□ 0.35
PHGDHO43175 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 AC079328.2-201ENST00000561241 3354 ntBASIC17.23■□□□□ 0.35
PHGDHO43175 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.23■□□□□ 0.35
PHGDHO43175 FAM220CP-201ENST00000395253 831 ntBASIC17.23■□□□□ 0.35
PHGDHO43175 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.23■□□□□ 0.35
PHGDHO43175 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.23■□□□□ 0.35
PHGDHO43175 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
PHGDHO43175 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.23■□□□□ 0.35
PHGDHO43175 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.23■□□□□ 0.35
PHGDHO43175 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
PHGDHO43175 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHGDHO43175 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.23■□□□□ 0.35
PHGDHO43175 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.22■□□□□ 0.35
PHGDHO43175 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PHGDHO43175 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PHGDHO43175 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 AL031133.1-201ENST00000406807 723 ntBASIC17.22■□□□□ 0.35
PHGDHO43175 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
PHGDHO43175 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.22■□□□□ 0.35
PHGDHO43175 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.22■□□□□ 0.35
PHGDHO43175 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
PHGDHO43175 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PHGDHO43175 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.22■□□□□ 0.35
PHGDHO43175 AC111152.3-201ENST00000569699 673 ntBASIC17.22■□□□□ 0.35
PHGDHO43175 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.22■□□□□ 0.35
PHGDHO43175 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PHGDHO43175 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.22■□□□□ 0.35
PHGDHO43175 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.22■□□□□ 0.35
PHGDHO43175 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.22■□□□□ 0.35
PHGDHO43175 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.22■□□□□ 0.35
PHGDHO43175 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHGDHO43175 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms