Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TNRC18O15417 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.5■□□□□ 0.55
TNRC18O15417 SDHAP3-202ENST00000515467 728 ntBASIC18.5■□□□□ 0.55
TNRC18O15417 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.5■□□□□ 0.55
TNRC18O15417 AL033527.5-201ENST00000641382 801 ntBASIC18.5■□□□□ 0.55
TNRC18O15417 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.5■□□□□ 0.55
TNRC18O15417 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.49■□□□□ 0.55
TNRC18O15417 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TNRC18O15417 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TNRC18O15417 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.49■□□□□ 0.55
TNRC18O15417 AC123567.1-201ENST00000548294 1261 ntBASIC18.49■□□□□ 0.55
TNRC18O15417 AC093726.1-201ENST00000608064 963 ntBASIC18.49■□□□□ 0.55
TNRC18O15417 AC148477.9-201ENST00000623974 539 ntBASIC18.49■□□□□ 0.55
TNRC18O15417 HLA-C-210ENST00000640219 976 ntBASIC18.49■□□□□ 0.55
TNRC18O15417 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.49■□□□□ 0.55
TNRC18O15417 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TNRC18O15417 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.49■□□□□ 0.55
TNRC18O15417 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 AC012569.1-201ENST00000591191 1524 ntBASIC18.49■□□□□ 0.55
TNRC18O15417 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TNRC18O15417 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.49■□□□□ 0.55
TNRC18O15417 AL133215.2-201ENST00000609242 977 ntBASIC18.49■□□□□ 0.55
TNRC18O15417 AL136301.1-201ENST00000615830 422 ntBASIC18.49■□□□□ 0.55
TNRC18O15417 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.49■□□□□ 0.55
TNRC18O15417 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNRC18O15417 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.49■□□□□ 0.55
TNRC18O15417 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNRC18O15417 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.48■□□□□ 0.55
TNRC18O15417 AL662890.1-201ENST00000396818 632 ntBASIC18.48■□□□□ 0.55
TNRC18O15417 UPF3AP2-201ENST00000457924 1132 ntBASIC18.48■□□□□ 0.55
TNRC18O15417 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.48■□□□□ 0.55
TNRC18O15417 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.48■□□□□ 0.55
TNRC18O15417 SLC25A47P1-201ENST00000531577 414 ntBASIC18.48■□□□□ 0.55
TNRC18O15417 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.48■□□□□ 0.55
TNRC18O15417 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.48■□□□□ 0.55
TNRC18O15417 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNRC18O15417 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.48■□□□□ 0.55
TNRC18O15417 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNRC18O15417 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.48■□□□□ 0.55
TNRC18O15417 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.48■□□□□ 0.55
TNRC18O15417 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNRC18O15417 AC233724.13-201ENST00000598383 410 ntBASIC18.48■□□□□ 0.55
TNRC18O15417 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.48■□□□□ 0.55
TNRC18O15417 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNRC18O15417 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNRC18O15417 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.48■□□□□ 0.55
TNRC18O15417 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNRC18O15417 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNRC18O15417 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TNRC18O15417 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.48■□□□□ 0.55
TNRC18O15417 AC044860.1-202ENST00000559481 777 ntBASIC18.48■□□□□ 0.55
TNRC18O15417 RN7SL555P-201ENST00000584742 339 ntBASIC18.48■□□□□ 0.55
TNRC18O15417 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.48■□□□□ 0.55
TNRC18O15417 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNRC18O15417 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.48■□□□□ 0.55
TNRC18O15417 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 AC009949.1-201ENST00000623048 1830 ntBASIC18.47■□□□□ 0.55
TNRC18O15417 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TNRC18O15417 AC104784.1-201ENST00000473096 294 ntBASIC18.47■□□□□ 0.55
TNRC18O15417 DUX4L45-201ENST00000566406 1057 ntBASIC18.47■□□□□ 0.55
TNRC18O15417 RN7SL560P-201ENST00000577943 264 ntBASIC18.47■□□□□ 0.55
TNRC18O15417 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.47■□□□□ 0.55
TNRC18O15417 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.47■□□□□ 0.55
TNRC18O15417 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNRC18O15417 TPRX2P-201ENST00000535362 881 ntBASIC18.47■□□□□ 0.55
TNRC18O15417 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.47■□□□□ 0.55
TNRC18O15417 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.47■□□□□ 0.55
TNRC18O15417 MIR6756-201ENST00000616240 63 ntBASIC18.47■□□□□ 0.55
TNRC18O15417 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.47■□□□□ 0.55
TNRC18O15417 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TNRC18O15417 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNRC18O15417 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNRC18O15417 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNRC18O15417 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.46■□□□□ 0.55
TNRC18O15417 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.46■□□□□ 0.55
TNRC18O15417 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.46■□□□□ 0.55
TNRC18O15417 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.46■□□□□ 0.55
TNRC18O15417 GABARAPL3-202ENST00000624044 1851 ntBASIC18.46■□□□□ 0.55
TNRC18O15417 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNRC18O15417 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNRC18O15417 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TNRC18O15417 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNRC18O15417 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms