Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 AL139327.4-201ENST00000612362 153 ntBASIC18.31■□□□□ 0.52
CAPN9O14815 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN9O14815 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN9O14815 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CAPN9O14815 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPN9O14815 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CAPN9O14815 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CAPN9O14815 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 AL020989.1-201ENST00000422979 469 ntBASIC18.3■□□□□ 0.52
CAPN9O14815 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CAPN9O14815 AF238378.1-201ENST00000526806 358 ntBASIC18.3■□□□□ 0.52
CAPN9O14815 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.3■□□□□ 0.52
CAPN9O14815 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.3■□□□□ 0.52
CAPN9O14815 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN9O14815 AL355877.3-201ENST00000622820 899 ntBASIC18.3■□□□□ 0.52
CAPN9O14815 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN9O14815 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.3■□□□□ 0.52
CAPN9O14815 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPN9O14815 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CAPN9O14815 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 AC084018.2-201ENST00000613093 2607 ntBASIC18.3■□□□□ 0.52
CAPN9O14815 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CAPN9O14815 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPN9O14815 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPN9O14815 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 LYSMD4-203ENST00000378904 2122 ntBASIC18.29■□□□□ 0.52
CAPN9O14815 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN9O14815 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.29■□□□□ 0.52
CAPN9O14815 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN9O14815 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN9O14815 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN9O14815 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 SCARNA2-201ENST00000458748 420 ntBASIC18.29■□□□□ 0.52
CAPN9O14815 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN9O14815 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN9O14815 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.29■□□□□ 0.52
CAPN9O14815 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CAPN9O14815 AC006538.3-201ENST00000612495 578 ntBASIC18.29■□□□□ 0.52
CAPN9O14815 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN9O14815 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN9O14815 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CAPN9O14815 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CAPN9O14815 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 AL356309.3-201ENST00000624132 1934 ntBASIC18.29■□□□□ 0.52
CAPN9O14815 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN9O14815 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.29■□□□□ 0.52
CAPN9O14815 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN9O14815 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 FAAHP1-202ENST00000446499 1238 ntBASIC18.28■□□□□ 0.52
CAPN9O14815 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN9O14815 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN9O14815 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CAPN9O14815 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN9O14815 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN9O14815 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms