Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.12■□□□□ 0.33
IFRD1O00458 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.12■□□□□ 0.33
IFRD1O00458 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IFRD1O00458 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.12■□□□□ 0.33
IFRD1O00458 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.12■□□□□ 0.33
IFRD1O00458 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.12■□□□□ 0.33
IFRD1O00458 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.12■□□□□ 0.33
IFRD1O00458 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.12■□□□□ 0.33
IFRD1O00458 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.12■□□□□ 0.33
IFRD1O00458 AL139288.1-201ENST00000623748 933 ntBASIC17.12■□□□□ 0.33
IFRD1O00458 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
IFRD1O00458 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IFRD1O00458 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
IFRD1O00458 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.12■□□□□ 0.33
IFRD1O00458 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.12■□□□□ 0.33
IFRD1O00458 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 AL356309.3-201ENST00000624132 1934 ntBASIC17.11■□□□□ 0.33
IFRD1O00458 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 AC106820.2-201ENST00000563775 3264 ntBASIC17.11■□□□□ 0.33
IFRD1O00458 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
IFRD1O00458 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.11■□□□□ 0.33
IFRD1O00458 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 AL020989.1-201ENST00000422979 469 ntBASIC17.11■□□□□ 0.33
IFRD1O00458 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.11■□□□□ 0.33
IFRD1O00458 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.11■□□□□ 0.33
IFRD1O00458 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.11■□□□□ 0.33
IFRD1O00458 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.11■□□□□ 0.33
IFRD1O00458 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.11■□□□□ 0.33
IFRD1O00458 STK25P1-201ENST00000585406 838 ntBASIC17.11■□□□□ 0.33
IFRD1O00458 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.11■□□□□ 0.33
IFRD1O00458 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.11■□□□□ 0.33
IFRD1O00458 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 AC080080.1-201ENST00000625121 2420 ntBASIC17.11■□□□□ 0.33
IFRD1O00458 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
IFRD1O00458 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.11■□□□□ 0.33
IFRD1O00458 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
IFRD1O00458 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFRD1O00458 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.1■□□□□ 0.33
IFRD1O00458 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
IFRD1O00458 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
IFRD1O00458 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.1■□□□□ 0.33
IFRD1O00458 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 AC132938.5-201ENST00000624980 1813 ntBASIC17.1■□□□□ 0.33
IFRD1O00458 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.1■□□□□ 0.33
IFRD1O00458 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.1■□□□□ 0.33
IFRD1O00458 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFRD1O00458 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms