Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
NFKBIEO00221 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.64■□□□□ 0.89
NFKBIEO00221 SLC22A20-204ENST00000530038 1673 ntBASIC20.64■□□□□ 0.89
NFKBIEO00221 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
NFKBIEO00221 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NFKBIEO00221 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NFKBIEO00221 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.63■□□□□ 0.89
NFKBIEO00221 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKBIEO00221 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.63■□□□□ 0.89
NFKBIEO00221 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.63■□□□□ 0.89
NFKBIEO00221 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NFKBIEO00221 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NFKBIEO00221 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKBIEO00221 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.63■□□□□ 0.89
NFKBIEO00221 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.63■□□□□ 0.89
NFKBIEO00221 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.63■□□□□ 0.89
NFKBIEO00221 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKBIEO00221 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.63■□□□□ 0.89
NFKBIEO00221 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
NFKBIEO00221 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKBIEO00221 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.63■□□□□ 0.89
NFKBIEO00221 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
NFKBIEO00221 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.63■□□□□ 0.89
NFKBIEO00221 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NFKBIEO00221 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKBIEO00221 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKBIEO00221 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NFKBIEO00221 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.62■□□□□ 0.89
NFKBIEO00221 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.62■□□□□ 0.89
NFKBIEO00221 HCG4-201ENST00000418983 998 ntBASIC20.62■□□□□ 0.89
NFKBIEO00221 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NFKBIEO00221 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.62■□□□□ 0.89
NFKBIEO00221 AC132938.2-201ENST00000579188 680 ntBASIC20.62■□□□□ 0.89
NFKBIEO00221 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.62■□□□□ 0.89
NFKBIEO00221 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NFKBIEO00221 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.62■□□□□ 0.89
NFKBIEO00221 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NFKBIEO00221 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.62■□□□□ 0.89
NFKBIEO00221 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.62■□□□□ 0.89
NFKBIEO00221 AL591163.1-201ENST00000641757 987 ntBASIC20.62■□□□□ 0.89
NFKBIEO00221 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.62■□□□□ 0.89
NFKBIEO00221 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NFKBIEO00221 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NFKBIEO00221 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
NFKBIEO00221 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.61■□□□□ 0.89
NFKBIEO00221 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.61■□□□□ 0.89
NFKBIEO00221 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.61■□□□□ 0.89
NFKBIEO00221 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.61■□□□□ 0.89
NFKBIEO00221 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
NFKBIEO00221 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.61■□□□□ 0.89
NFKBIEO00221 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.61■□□□□ 0.89
NFKBIEO00221 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.61■□□□□ 0.89
NFKBIEO00221 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.61■□□□□ 0.89
NFKBIEO00221 TEX28P1-201ENST00000613479 1221 ntBASIC20.61■□□□□ 0.89
NFKBIEO00221 TEX28P2-201ENST00000617764 1221 ntBASIC20.61■□□□□ 0.89
NFKBIEO00221 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.61■□□□□ 0.89
NFKBIEO00221 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.61■□□□□ 0.89
NFKBIEO00221 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.61■□□□□ 0.89
NFKBIEO00221 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.61■□□□□ 0.89
NFKBIEO00221 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.61■□□□□ 0.89
NFKBIEO00221 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 AC073130.3-201ENST00000624389 2278 ntBASIC20.61■□□□□ 0.89
NFKBIEO00221 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKBIEO00221 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NFKBIEO00221 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms