Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC012640.2-201ENST00000561606 901 ntBASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AL691403.2-201ENST00000618460 490 ntBASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC005593.1-201ENST00000624894 515 ntBASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC138932.1-201ENST00000534164 6830 ntBASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.03■□□□□ 0.32
TMX2-CTNND1H3BSU7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 AL162727.3-201ENST00000635661 2787 ntBASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 UNC93B6-202ENST00000528242 690 ntBASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.02■□□□□ 0.32
TMX2-CTNND1H3BSU7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TMX2-CTNND1H3BSU7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC073592.4-201ENST00000623827 446 ntBASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.01■□□□□ 0.31
TMX2-CTNND1H3BSU7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms