Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 AC004835.2-201ENST00000603762 682 ntBASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC144AA2RUR9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC24.64■■□□□ 1.53
CCDC144AA2RUR9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCDC144AA2RUR9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCDC144AA2RUR9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC24.64■■□□□ 1.53
CCDC144AA2RUR9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC24.64■■□□□ 1.53
CCDC144AA2RUR9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCDC144AA2RUR9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC144AA2RUR9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 HMGA1P7-201ENST00000406908 502 ntBASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 AC023141.5-201ENST00000458585 616 ntBASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 AL353732.1-201ENST00000569618 1459 ntBASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CCDC144AA2RUR9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 AL139400.1-201ENST00000366220 510 ntBASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 MIR3197-201ENST00000582241 73 ntBASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 SLC22A20-204ENST00000530038 1673 ntBASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 NOC2LP2-201ENST00000407594 1944 ntBASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC24.61■■□□□ 1.53
CCDC144AA2RUR9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms