Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 FRMD8P1-201ENST00000440433 1524 ntBASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 TP73-AS1-210ENST00000637775 1455 ntBASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 AC233702.3-201ENST00000578656 1387 ntBASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 AC116407.4-201ENST00000623319 1061 ntBASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 PCDH8P1-201ENST00000428983 2773 ntBASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
TCRBV7S3A2A0A539 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRBV7S3A2A0A539 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 KRT18P1-202ENST00000452408 1331 ntBASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 TPSP2-201ENST00000561760 610 ntBASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 AC073592.5-201ENST00000624854 528 ntBASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV7S3A2A0A539 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TCRBV7S3A2A0A539 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV7S3A2A0A539 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV7S3A2A0A539 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV7S3A2A0A539 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV7S3A2A0A539 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TCRBV7S3A2A0A539 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms