Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 AL356585.2-201ENST00000625078 2396 ntBASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 AC008764.7-201ENST00000593779 1081 ntBASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 AL357033.4-201ENST00000617703 1807 ntBASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC8.93□□□□□ -0.98
LINC01558Q9Y6Z2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 AC005912.2-201ENST00000619492 2400 ntBASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 KATNBL1P6-202ENST00000562413 1466 ntBASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 MIR3181-201ENST00000578512 73 ntBASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LINC01558Q9Y6Z2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms