Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 PAUPAR-201ENST00000630360 2965 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 AC022188.1-201ENST00000620960 1664 ntBASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 NUDT16P1-203ENST00000513809 620 ntBASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 AC092850.2-201ENST00000623821 2697 ntBASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.21□□□□□ -0.13
RCL1Q9Y2P8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RCL1Q9Y2P8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.21□□□□□ -0.14
RCL1Q9Y2P8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.21□□□□□ -0.14
RCL1Q9Y2P8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
RCL1Q9Y2P8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.21□□□□□ -0.14
RCL1Q9Y2P8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RCL1Q9Y2P8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 AL139327.4-201ENST00000612362 153 ntBASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms