Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 C20orf181-201ENST00000623918 480 ntBASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 AC104581.1-202ENST00000635932 2618 ntBASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NCKAP1Q9Y2A7 AC009113.1-201ENST00000570267 2443 ntBASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NCKAP1Q9Y2A7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 BCAR1-209ENST00000546196 1340 ntBASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AL590787.1-201ENST00000568856 1315 ntBASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AL139327.4-201ENST00000612362 153 ntBASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AC004877.2-201ENST00000623941 599 ntBASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1Q9Y2A7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 DNAJB3-202ENST00000449667 1266 ntBASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 SNHG9-202ENST00000564014 471 ntBASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 AL513190.1-201ENST00000621254 727 ntBASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 AL135999.2-201ENST00000622438 1686 ntBASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1Q9Y2A7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1Q9Y2A7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1Q9Y2A7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1Q9Y2A7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms