Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 IGHV3-42-201ENST00000520410 361 ntBASIC16.41■□□□□ 0.22
LHX6Q9UPM6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 AL662799.1-202ENST00000614205 422 ntBASIC16.41■□□□□ 0.22
LHX6Q9UPM6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX6Q9UPM6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AC018470.1-201ENST00000624790 3129 ntBASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AL627223.1-201ENST00000416693 442 ntBASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 YY1P1-201ENST00000427625 668 ntBASIC16.4■□□□□ 0.22
LHX6Q9UPM6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 KLF2P3-201ENST00000451977 1087 ntBASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AC121493.1-201ENST00000602316 450 ntBASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AL390754.1-201ENST00000619088 582 ntBASIC16.4■□□□□ 0.22
LHX6Q9UPM6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 TUBB3P1-201ENST00000405796 1332 ntBASIC16.4■□□□□ 0.22
LHX6Q9UPM6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX6Q9UPM6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LHX6Q9UPM6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
LHX6Q9UPM6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LHX6Q9UPM6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 AC020763.4-201ENST00000623414 4170 ntBASIC16.39■□□□□ 0.21
LHX6Q9UPM6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 PMPCAP1-201ENST00000508114 1576 ntBASIC16.39■□□□□ 0.21
LHX6Q9UPM6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 RPS6P14-201ENST00000425165 719 ntBASIC16.39■□□□□ 0.21
LHX6Q9UPM6 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 KRT8P2-201ENST00000556193 944 ntBASIC16.39■□□□□ 0.21
LHX6Q9UPM6 AC023141.13-201ENST00000604991 943 ntBASIC16.39■□□□□ 0.21
LHX6Q9UPM6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX6Q9UPM6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LHX6Q9UPM6 AC107890.1-201ENST00000422478 521 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms