Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 NFIC-211ENST00000641145 8399 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AC122714.2-201ENST00000502787 707 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AL356488.2-201ENST00000602755 427 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AC140113.2-201ENST00000604370 208 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AL022326.1-202ENST00000641533 845 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AC004817.3-201ENST00000602957 2129 ntBASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPIPA1Q9UND3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 PMPCAP1-201ENST00000508114 1576 ntBASIC16■□□□□ 0.15
NPIPA1Q9UND3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 LAGE3P1-201ENST00000425356 484 ntBASIC16■□□□□ 0.15
NPIPA1Q9UND3 COX10-202ENST00000429152 875 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 AC034105.1-201ENST00000563488 319 ntBASIC16■□□□□ 0.15
NPIPA1Q9UND3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA1Q9UND3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NPIPA1Q9UND3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 AC103564.2-201ENST00000432853 1299 ntBASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPA1Q9UND3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms