Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 AC096734.2-201ENST00000562054 433 ntBASIC18.32■□□□□ 0.52
CDH22Q9UJ99 AC109462.3-201ENST00000573934 613 ntBASIC18.32■□□□□ 0.52
CDH22Q9UJ99 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 AL805961.1-202ENST00000641562 540 ntBASIC18.32■□□□□ 0.52
CDH22Q9UJ99 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH22Q9UJ99 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 AC004461.1-201ENST00000412461 403 ntBASIC18.31■□□□□ 0.52
CDH22Q9UJ99 COX20P2-201ENST00000452636 358 ntBASIC18.31■□□□□ 0.52
CDH22Q9UJ99 SIGLEC30P-201ENST00000455569 941 ntBASIC18.31■□□□□ 0.52
CDH22Q9UJ99 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 AC092902.6-201ENST00000641783 218 ntBASIC18.31■□□□□ 0.52
CDH22Q9UJ99 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH22Q9UJ99 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC097637.2-201ENST00000624096 1997 ntBASIC18.3■□□□□ 0.52
CDH22Q9UJ99 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 RHOQP3-201ENST00000437982 621 ntBASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC109322.1-201ENST00000524499 1264 ntBASIC18.3■□□□□ 0.52
CDH22Q9UJ99 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC004449.1-201ENST00000564240 433 ntBASIC18.3■□□□□ 0.52
CDH22Q9UJ99 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC005498.2-205ENST00000593218 784 ntBASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH22Q9UJ99 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms