Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 LINC00982-205ENST00000420957 435 ntBASIC17.14■□□□□ 0.33
NCDNQ9UBB6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 FAM185BP-201ENST00000443595 716 ntBASIC17.14■□□□□ 0.33
NCDNQ9UBB6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 AL662799.1-202ENST00000614205 422 ntBASIC17.14■□□□□ 0.33
NCDNQ9UBB6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NCDNQ9UBB6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 AL158211.3-201ENST00000607385 239 ntBASIC17.13■□□□□ 0.33
NCDNQ9UBB6 GMCL1P1-201ENST00000463439 1581 ntBASIC17.13■□□□□ 0.33
NCDNQ9UBB6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.13■□□□□ 0.33
NCDNQ9UBB6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 PIN1P1-201ENST00000412108 996 ntBASIC17.12■□□□□ 0.33
NCDNQ9UBB6 SPDYE7P-202ENST00000420373 878 ntBASIC17.12■□□□□ 0.33
NCDNQ9UBB6 FAM58DP-201ENST00000428076 619 ntBASIC17.12■□□□□ 0.33
NCDNQ9UBB6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCDNQ9UBB6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCDNQ9UBB6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 218.4 ms