Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1EQ9GZS1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 LINC00982-205ENST00000420957 435 ntBASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 AC073648.2-201ENST00000510116 352 ntBASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 AC021087.4-201ENST00000563761 564 ntBASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 AL589182.2-201ENST00000619332 1049 ntBASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.55■□□□□ 0.4
POLR1EQ9GZS1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SLC25A1P3-201ENST00000395415 828 ntBASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 TPM4P1-201ENST00000436100 807 ntBASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 AC025062.2-201ENST00000605477 670 ntBASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1EQ9GZS1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1EQ9GZS1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
POLR1EQ9GZS1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
POLR1EQ9GZS1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms