Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CKBP1-201ENST00000565489 1086 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SOX15-203ENST00000570788 1093 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MARS-234ENST00000630571 216 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MARS-235ENST00000630803 183 ntTSL 3 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 GPAT2P1-201ENST00000444924 1672 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AC006449.5-201ENST00000610658 2098 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 CYP2T1P-202ENST00000641596 2535 ntBASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LCE3DQ9BYE3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC005915.1-201ENST00000624912 2018 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 LINC00554-201ENST00000564841 3011 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms