Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN18Q99952 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN18Q99952 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PTPN18Q99952 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN18Q99952 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.64■□□□□ 0.74
PTPN18Q99952 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN18Q99952 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN18Q99952 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PTPN18Q99952 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.64■□□□□ 0.73
PTPN18Q99952 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN18Q99952 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN18Q99952 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.64■□□□□ 0.73
PTPN18Q99952 ATP5G2P4-201ENST00000442175 420 ntBASIC19.64■□□□□ 0.73
PTPN18Q99952 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN18Q99952 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN18Q99952 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN18Q99952 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.64■□□□□ 0.73
PTPN18Q99952 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN18Q99952 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.64■□□□□ 0.73
PTPN18Q99952 AC073592.8-201ENST00000624126 511 ntBASIC19.64■□□□□ 0.73
PTPN18Q99952 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN18Q99952 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN18Q99952 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN18Q99952 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PTPN18Q99952 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN18Q99952 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN18Q99952 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN18Q99952 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN18Q99952 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN18Q99952 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN18Q99952 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.63■□□□□ 0.73
PTPN18Q99952 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN18Q99952 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN18Q99952 AC022144.1-201ENST00000602255 1580 ntBASIC19.63■□□□□ 0.73
PTPN18Q99952 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PTPN18Q99952 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PTPN18Q99952 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN18Q99952 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.63■□□□□ 0.73
PTPN18Q99952 AL138918.1-201ENST00000568306 659 ntBASIC19.63■□□□□ 0.73
PTPN18Q99952 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN18Q99952 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN18Q99952 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN18Q99952 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PTPN18Q99952 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PTPN18Q99952 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN18Q99952 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.62■□□□□ 0.73
PTPN18Q99952 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN18Q99952 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.62■□□□□ 0.73
PTPN18Q99952 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PTPN18Q99952 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 AC004233.3-201ENST00000607794 1269 ntBASIC19.62■□□□□ 0.73
PTPN18Q99952 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN18Q99952 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN18Q99952 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN18Q99952 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN18Q99952 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN18Q99952 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PTPN18Q99952 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN18Q99952 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PTPN18Q99952 CU639417.3-201ENST00000624240 1404 ntBASIC19.61■□□□□ 0.73
PTPN18Q99952 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN18Q99952 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN18Q99952 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN18Q99952 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN18Q99952 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN18Q99952 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN18Q99952 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PTPN18Q99952 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN18Q99952 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN18Q99952 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PTPN18Q99952 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN18Q99952 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN18Q99952 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN18Q99952 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN18Q99952 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPN18Q99952 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms