Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.42■□□□□ 0.38
NDNQ99608 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NDNQ99608 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
NDNQ99608 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
NDNQ99608 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 UBALD1-205ENST00000590891 2641 ntBASIC17.41■□□□□ 0.38
NDNQ99608 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.41■□□□□ 0.38
NDNQ99608 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.41■□□□□ 0.38
NDNQ99608 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 BX276092.5-203ENST00000456199 560 ntBASIC17.41■□□□□ 0.38
NDNQ99608 AC002558.1-201ENST00000488906 803 ntBASIC17.41■□□□□ 0.38
NDNQ99608 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.41■□□□□ 0.38
NDNQ99608 AC087388.1-201ENST00000571370 1112 ntBASIC17.41■□□□□ 0.38
NDNQ99608 AC109462.3-201ENST00000573934 613 ntBASIC17.41■□□□□ 0.38
NDNQ99608 AL138831.2-201ENST00000606564 490 ntBASIC17.41■□□□□ 0.38
NDNQ99608 AC019129.2-201ENST00000609837 1235 ntBASIC17.41■□□□□ 0.38
NDNQ99608 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.41■□□□□ 0.38
NDNQ99608 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NDNQ99608 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.41■□□□□ 0.38
NDNQ99608 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
NDNQ99608 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDNQ99608 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NDNQ99608 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NDNQ99608 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.4■□□□□ 0.38
NDNQ99608 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.4■□□□□ 0.38
NDNQ99608 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NDNQ99608 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.4■□□□□ 0.38
NDNQ99608 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.4■□□□□ 0.38
NDNQ99608 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.4■□□□□ 0.38
NDNQ99608 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NDNQ99608 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.4■□□□□ 0.38
NDNQ99608 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 AC092850.2-201ENST00000623821 2697 ntBASIC17.4■□□□□ 0.38
NDNQ99608 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDNQ99608 AC016734.2-201ENST00000624325 1377 ntBASIC17.4■□□□□ 0.38
NDNQ99608 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NDNQ99608 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
NDNQ99608 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NDNQ99608 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.39■□□□□ 0.37
NDNQ99608 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDNQ99608 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDNQ99608 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NDNQ99608 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDNQ99608 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms