Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.47■□□□□ 0.07
SPENQ96T58 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 AC112191.1-201ENST00000523689 701 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.47■□□□□ 0.07
SPENQ96T58 HILS1-202ENST00000545329 423 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 AC010336.2-201ENST00000564226 506 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 AL606495.2-201ENST00000605867 535 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 AC026120.1-201ENST00000611536 926 ntBASIC15.47■□□□□ 0.07
SPENQ96T58 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.47■□□□□ 0.07
SPENQ96T58 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.47■□□□□ 0.07
SPENQ96T58 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPENQ96T58 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SPENQ96T58 AC004790.1-201ENST00000612686 536 ntBASIC15.46■□□□□ 0.07
SPENQ96T58 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SPENQ96T58 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SPENQ96T58 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.46■□□□□ 0.07
SPENQ96T58 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SPENQ96T58 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SPENQ96T58 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.46■□□□□ 0.07
SPENQ96T58 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.46■□□□□ 0.07
SPENQ96T58 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.46■□□□□ 0.07
SPENQ96T58 PP12613-201ENST00000424958 2230 ntBASIC15.46■□□□□ 0.07
SPENQ96T58 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
SPENQ96T58 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPENQ96T58 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPENQ96T58 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SPENQ96T58 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.46■□□□□ 0.06
SPENQ96T58 AC022494.1-201ENST00000466044 728 ntBASIC15.46■□□□□ 0.06
SPENQ96T58 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
SPENQ96T58 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.45■□□□□ 0.06
SPENQ96T58 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.45■□□□□ 0.06
SPENQ96T58 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.45■□□□□ 0.06
SPENQ96T58 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.45■□□□□ 0.06
SPENQ96T58 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.45■□□□□ 0.06
SPENQ96T58 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 AC009477.1-201ENST00000452936 217 ntBASIC15.45■□□□□ 0.06
SPENQ96T58 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.45■□□□□ 0.06
SPENQ96T58 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 GGTLC5P-201ENST00000617623 998 ntBASIC15.45■□□□□ 0.06
SPENQ96T58 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SPENQ96T58 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.45■□□□□ 0.06
SPENQ96T58 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.45■□□□□ 0.06
SPENQ96T58 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 AC002056.1-201ENST00000395613 760 ntBASIC15.45■□□□□ 0.06
SPENQ96T58 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.45■□□□□ 0.06
SPENQ96T58 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.45■□□□□ 0.06
SPENQ96T58 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPENQ96T58 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SPENQ96T58 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.44■□□□□ 0.06
SPENQ96T58 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.44■□□□□ 0.06
SPENQ96T58 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SPENQ96T58 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.44■□□□□ 0.06
SPENQ96T58 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.44■□□□□ 0.06
SPENQ96T58 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.44■□□□□ 0.06
SPENQ96T58 MIR6752-201ENST00000618442 71 ntBASIC15.44■□□□□ 0.06
SPENQ96T58 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SPENQ96T58 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.44■□□□□ 0.06
SPENQ96T58 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SPENQ96T58 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.44■□□□□ 0.06
SPENQ96T58 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.44■□□□□ 0.06
SPENQ96T58 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPENQ96T58 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.44■□□□□ 0.06
SPENQ96T58 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.44■□□□□ 0.06
SPENQ96T58 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.44■□□□□ 0.06
SPENQ96T58 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SPENQ96T58 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms