Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 RN7SL692P-201ENST00000464677 288 ntBASIC17.14■□□□□ 0.33
CLDN23Q96B33 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN23Q96B33 REXO1L9P-201ENST00000604264 2108 ntBASIC17.14■□□□□ 0.33
CLDN23Q96B33 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN23Q96B33 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN23Q96B33 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN23Q96B33 AC100757.3-201ENST00000622361 1406 ntBASIC17.13■□□□□ 0.33
CLDN23Q96B33 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 AC073592.8-201ENST00000624126 511 ntBASIC17.12■□□□□ 0.33
CLDN23Q96B33 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN23Q96B33 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN23Q96B33 AL353732.1-201ENST00000569618 1459 ntBASIC17.12■□□□□ 0.33
CLDN23Q96B33 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 HCG4-201ENST00000418983 998 ntBASIC17.11■□□□□ 0.33
CLDN23Q96B33 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms