Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 AC025062.2-201ENST00000605477 670 ntBASIC15.58■□□□□ 0.08
CPNE4Q96A23 AL589182.2-201ENST00000619332 1049 ntBASIC15.58■□□□□ 0.08
CPNE4Q96A23 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 NCF1C-201ENST00000438382 1427 ntBASIC15.58■□□□□ 0.08
CPNE4Q96A23 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 LAGE3P1-201ENST00000425356 484 ntBASIC15.57■□□□□ 0.08
CPNE4Q96A23 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 AC009078.2-202ENST00000463353 338 ntBASIC15.57■□□□□ 0.08
CPNE4Q96A23 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 AC093909.1-201ENST00000504731 1122 ntBASIC15.57■□□□□ 0.08
CPNE4Q96A23 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 OR7E14P-202ENST00000530490 1290 ntBASIC15.57■□□□□ 0.08
CPNE4Q96A23 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 SLC25A6P4-201ENST00000586535 553 ntBASIC15.57■□□□□ 0.08
CPNE4Q96A23 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 PRORSD1P-202ENST00000563365 2154 ntBASIC15.57■□□□□ 0.08
CPNE4Q96A23 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 AL138688.1-201ENST00000624851 1594 ntBASIC15.57■□□□□ 0.08
CPNE4Q96A23 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE4Q96A23 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE4Q96A23 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 AC004817.3-201ENST00000602957 2129 ntBASIC15.56■□□□□ 0.08
CPNE4Q96A23 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 MRPL3P1-201ENST00000400109 1033 ntBASIC15.56■□□□□ 0.08
CPNE4Q96A23 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 AC139887.3-201ENST00000568585 713 ntBASIC15.56■□□□□ 0.08
CPNE4Q96A23 AP001005.1-201ENST00000571755 1248 ntBASIC15.56■□□□□ 0.08
CPNE4Q96A23 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 AC107918.4-202ENST00000641623 219 ntBASIC15.56■□□□□ 0.08
CPNE4Q96A23 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms