Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 AC004790.2-201ENST00000623588 572 ntBASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 AC018470.1-201ENST00000624790 3129 ntBASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ATP6V0A1Q93050 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 AC002310.6-201ENST00000624451 1377 ntBASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 OR6D1P-202ENST00000641007 5290 ntBASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 MCCD1P2-201ENST00000423228 335 ntBASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 AL805961.1-202ENST00000641562 540 ntBASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP6V0A1Q93050 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 AC211486.1-202ENST00000416371 468 ntBASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 PRSS29P-201ENST00000440800 595 ntBASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 HCG4B-203ENST00000450128 991 ntBASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 AC211476.1-201ENST00000503899 468 ntBASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 AC018845.2-201ENST00000568326 409 ntBASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 AC092865.6-201ENST00000642101 219 ntBASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP6V0A1Q93050 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ATP6V0A1Q93050 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms