Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.63□□□□□ -0.07
RTN4IP1Q8WWV3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 PCDH8P1-201ENST00000428983 2773 ntBASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 AL049597.2-201ENST00000565575 961 ntBASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 AC083849.1-201ENST00000615227 514 ntBASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RTN4IP1Q8WWV3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 AC008894.3-201ENST00000624324 3103 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 LYSMD4-203ENST00000378904 2122 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 IGHGP-201ENST00000390555 1178 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 GPR32P1-201ENST00000601788 811 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 AC004263.2-201ENST00000617183 678 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 FLJ38576-201ENST00000623820 2459 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 AL139384.1-201ENST00000612143 3047 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 DOC2GP-204ENST00000639052 2548 ntBASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RTN4IP1Q8WWV3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms