Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 PTCHD3P3-201ENST00000403073 906 ntBASIC17.4■□□□□ 0.38
CHD5Q8TDI0 KRT18P2-201ENST00000447938 1258 ntBASIC17.4■□□□□ 0.38
CHD5Q8TDI0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD5Q8TDI0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHD5Q8TDI0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.39■□□□□ 0.38
CHD5Q8TDI0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHD5Q8TDI0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 IGLL3P-201ENST00000412472 434 ntBASIC17.39■□□□□ 0.37
CHD5Q8TDI0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 AC004832.2-201ENST00000426397 482 ntBASIC17.39■□□□□ 0.37
CHD5Q8TDI0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD5Q8TDI0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 AC092053.1-201ENST00000605787 1936 ntBASIC17.38■□□□□ 0.37
CHD5Q8TDI0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 POLD2P1-201ENST00000511220 997 ntBASIC17.38■□□□□ 0.37
CHD5Q8TDI0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 AC004790.2-201ENST00000623588 572 ntBASIC17.38■□□□□ 0.37
CHD5Q8TDI0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD5Q8TDI0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 MED15P5-201ENST00000423150 992 ntBASIC17.37■□□□□ 0.37
CHD5Q8TDI0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 PRSS29P-201ENST00000440800 595 ntBASIC17.37■□□□□ 0.37
CHD5Q8TDI0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.37■□□□□ 0.37
CHD5Q8TDI0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms