Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 AC093525.9-201ENST00000624961 1746 ntBASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 IGHV3-52-201ENST00000519770 353 ntBASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLHC1Q8NHS4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
CLHC1Q8NHS4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CLHC1Q8NHS4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
CLHC1Q8NHS4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
CLHC1Q8NHS4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 KRT18P21-201ENST00000515767 1272 ntBASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 AL138831.2-201ENST00000606564 490 ntBASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLHC1Q8NHS4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms