Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 AL009183.1-201ENST00000603760 355 ntBASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 AC107918.2-201ENST00000530817 355 ntBASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 COX11-210ENST00000639671 696 ntBASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 AC009407.1-201ENST00000568958 598 ntBASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 AL590787.1-201ENST00000568856 1315 ntBASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 HMGA1P7-201ENST00000406908 502 ntBASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 AC099568.2-201ENST00000609194 695 ntBASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC168Q8NDH2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.33□□□□□ -0.11
CCDC168Q8NDH2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC168Q8NDH2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms