Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 AC148477.5-201ENST00000625164 1645 ntBASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 MIR7706-201ENST00000613747 67 ntBASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 AC004817.3-201ENST00000602957 2129 ntBASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH20Q8N6Y1 LINC00304-203ENST00000565008 1864 ntBASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 HLA-J-201ENST00000462773 1622 ntBASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDH20Q8N6Y1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDH20Q8N6Y1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCDH20Q8N6Y1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDH20Q8N6Y1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
PCDH20Q8N6Y1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AC139887.3-201ENST00000568585 713 ntBASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AL589182.2-201ENST00000619332 1049 ntBASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 AC008735.5-201ENST00000623544 497 ntBASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH20Q8N6Y1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms