Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 CROCCP2-202ENST00000412962 2773 ntBASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC33Q8N5R6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 AC133963.1-201ENST00000504166 1679 ntBASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 AC007967.3-201ENST00000434308 558 ntBASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 AL356309.3-201ENST00000624132 1934 ntBASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC33Q8N5R6 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 MIR1233-2-201ENST00000408138 82 ntBASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 MIR1233-1-201ENST00000408722 82 ntBASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 DDX43P3-201ENST00000441064 443 ntBASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 AC092910.1-201ENST00000482027 1129 ntBASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC33Q8N5R6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms