Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC26.84■■□□□ 1.89
VPS8Q8N3P4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 ADH5P3-201ENST00000433842 1137 ntBASIC26.83■■□□□ 1.89
VPS8Q8N3P4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC26.83■■□□□ 1.89
VPS8Q8N3P4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
VPS8Q8N3P4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC26.83■■□□□ 1.88
VPS8Q8N3P4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AC006538.3-201ENST00000612495 578 ntBASIC26.82■■□□□ 1.88
VPS8Q8N3P4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 UPF3AP3-201ENST00000420996 769 ntBASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 YBX1P5-201ENST00000509441 847 ntBASIC26.82■■□□□ 1.88
VPS8Q8N3P4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC26.82■■□□□ 1.88
VPS8Q8N3P4 AC068137.2-201ENST00000605408 478 ntBASIC26.82■■□□□ 1.88
VPS8Q8N3P4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 AC025580.3-201ENST00000617932 1424 ntBASIC26.81■■□□□ 1.88
VPS8Q8N3P4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 AC092919.2-201ENST00000623631 1645 ntBASIC26.81■■□□□ 1.88
VPS8Q8N3P4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 TOP3BP1-201ENST00000420768 1380 ntBASIC26.81■■□□□ 1.88
VPS8Q8N3P4 DNAJB3-201ENST00000446806 729 ntBASIC26.81■■□□□ 1.88
VPS8Q8N3P4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 AC005412.3-201ENST00000580309 715 ntBASIC26.81■■□□□ 1.88
VPS8Q8N3P4 AC023141.13-201ENST00000604991 943 ntBASIC26.81■■□□□ 1.88
VPS8Q8N3P4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC26.81■■□□□ 1.88
VPS8Q8N3P4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
VPS8Q8N3P4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms